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SRED provides information on RNA Editing for ovis aries. There are two ways to search the database: — By providing a region of sheep genome — By searching for RNA editing relevant to a gene of interest.

Region Based Search

As shown in the figure below, the RNA editing events for the region 191718-194298 on chromosome 1 are displayed in the results. The first three columns show the genomic location information. "Type" indicates the type of RNA editing. "Strand" specifies the strand information. "Gene Name" displays the gene where the RNA editing occurs. "Tissue" shows the tissues in which the editing site was identified. "Region" provides gene annotation details. Users can download the RNA editing sites of interest by clicking the "Download as CSV" button.

Region Based Search
Gene Based Search

You can also search for RNA editing sites by gene name. Enter the name of your gene of interest (e.g., HDAC4) in the "Name" search box to retrieve RNA editing events occurring in that gene. As shown in the figure, the results include: The first three columns display the genomic coordinates of the editing sites. "Type" indicates the RNA editing type. "Strand" specifies the strand orientation. "Gene Name" shows the gene where the editing occurs. "Tissue" lists the tissues in which the site was detected. "Region" provides gene annotation details. Users can download the RNA editing sites of interest by clicking the "Download as CSV" button.

Region Based Search